Publications

Oral surgery, oral medicine, oral pathology and oral radiology. 2012-12-01; 114.6: 764-70.
Metagenomic investigation of microbes and viruses in patients with jaw osteonecrosis associated with bisphosphonate therapy
Sedghizadeh PP, Yooseph S, Fadrosh DW, Zeigler-Allen L, Thiagarajan M, Salek H, Farahnik F, Williamson SJ
PMID: 23159114
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc. 2012-12-01; 25.12: 1599-608.
Global mutational profiling of formalin-fixed human colon cancers from a pathology archive
Adams MD, Veigl ML, Wang Z, Molyneux N, Sun S, Guda K, Yu X, Markowitz SD, Willis J
PMID: 22878650
Nucleic acids research. 2012-12-01; 40.22: e172.
PanOCT: automated clustering of orthologs using conserved gene neighborhood for pan-genomic analysis of bacterial strains and closely related species
Fouts DE, Brinkac L, Beck E, Inman J, Sutton G
PMID: 22904089
Methods (San Diego, Calif.). 2012-12-01; 58.4: 392-9.
Studying protein complexes by the yeast two-hybrid system
Rajagopala SV, Sikorski P, Caufield JH, Tovchigrechko A, Uetz P
PMID: 22841565
Viruses. 2012-11-19; 4.11: 3209-26.
Virus pathogen database and analysis resource (ViPR): a comprehensive bioinformatics database and analysis resource for the coronavirus research community
Pickett BE, Greer DS, Zhang Y, Stewart L, Zhou L, Sun G, Gu Z, Kumar S, Zaremba S, Larsen CN, Jen W, Klem EB, Scheuermann RH
PMID: 23202522
BMC genomics. 2012-11-09; 13.603.
Comparative genomic analysis and phylogenetic position of Theileria equi
Kappmeyer LS, Thiagarajan M, Herndon DR, Ramsay JD, Caler E, Djikeng A, Gillespie JJ, Lau AO, Roalson EH, Silva JC, Silva MG, Suarez CE, Ueti MW, Nene VM, Mealey RH, Knowles DP, Brayton KA
PMID: 23137308
PloS one. 2012-11-07; 7.11: e48289.
Next generation sequencing to define prokaryotic and fungal diversity in the bovine rumen
Fouts DE, Szpakowski S, Purushe J, Torralba M, Waterman RC, MacNeil MD, Alexander LJ, Nelson KE
PMID: 23144861
Virology journal. 2012-11-06; 9.261.
Automated degenerate PCR primer design for high-throughput sequencing improves efficiency of viral sequencing
Li K, Shrivastava S, Brownley A, Katzel D, Bera J, Nguyen AT, Thovarai V, Halpin R, Stockwell TB
PMID: 23131097
AMIA ... Annual Symposium proceedings. AMIA Symposium. 2012-11-03; 2012.779-88.
A machine learning approach for identifying anatomical locations of actionable findings in radiology reports
Roberts K, Rink B, Harabagiu SM, Scheuermann RH, Toomay S, Browning T, Bosler T, Peshock R
PMID: 23304352
Journal of bacteriology. 2012-11-01; 194.22: 6356-7.
Draft genome sequence determination for cystic fibrosis and chronic granulomatous disease Burkholderia multivorans isolates
Varga JJ, Losada L, Zelazny AM, Brinkac L, Harkins D, Radune D, Hostetler J, Sampaio EP, Ronning CM, Nierman WC, Greenberg DE, Holland SM, Goldberg JB
PMID: 23105085

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