Publications

FEMS microbiology letters. 2011-04-01; 317.1: 9-26.
The annotated complete DNA sequence of Enterococcus faecalis bacteriophage φEf11 and its comparison with all available phage and predicted prophage genomes
Stevens RH, Ektefaie MR, Fouts DE
PMID: 21204936
PloS one. 2011-03-23; 6.3: e17722.
Single virus genomics: a new tool for virus discovery
Allen LZ, Ishoey T, Novotny MA, McLean JS, Lasken RS, Williamson SJ
PMID: 21436882
PloS one. 2011-03-18; 6.3: e18011.
Stalking the fourth domain in metagenomic data: searching for, discovering, and interpreting novel, deep branches in marker gene phylogenetic trees
Wu D, Wu M, Halpern A, Rusch DB, Yooseph S, Frazier M, Venter JC, Eisen JA
PMID: 21437252
Proceedings of the National Academy of Sciences of the United States of America. 2011-03-08; 108.10: 3830-7.
Efficiency of the CO2-concentrating mechanism of diatoms
Hopkinson BM, Dupont CL, Allen AE, Morel FM
PMID: 21321195
Cell. 2011-03-04; 144.5: 675-88.
TLR signaling is required for Salmonella typhimurium virulence
Arpaia N, Godec J, Lau L, Sivick KE, McLaughlin LM, Jones MB, Dracheva T, Peterson SN, Monack DM, Barton GM
PMID: 21376231
Nature. 2011-03-03; 471.7336: 63-7.
Somatic coding mutations in human induced pluripotent stem cells
Gore A, Li Z, Fung HL, Young JE, Agarwal S, Antosiewicz-Bourget J, Canto I, Giorgetti A, Israel MA, Kiskinis E, Lee JH, Loh YH, Manos PD, Montserrat N, Panopoulos AD, Ruiz S, Wilbert ML, Yu J, Kirkness EF, Izpisua Belmonte JC, Rossi DJ, Thomson JA, Eggan K, Daley GQ, Goldstein LS, Zhang K
PMID: 21368825
Plasmid. 2011-03-01; 65.2: 118-24.
Streptomyces turgidiscabies Car8 contains a modular pathogenicity island that shares virulence genes with other actinobacterial plant pathogens
Huguet-Tapia JC, Badger JH, Loria R, Pettis GS
PMID: 21087627
Genome research. 2011-03-01; 21.3: 494-504.
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Haas BJ, Gevers D, Earl AM, Feldgarden M, Ward DV, Giannoukos G, Ciulla D, Tabbaa D, Highlander SK, Sodergren E, Methé B, DeSantis TZ, Human Microbiome Consortium, Petrosino JF, Knight R, Birren BW
PMID: 21212162
Biotechnology letters. 2011-03-01; 33.3: 549-55.
Single-step linker-based combinatorial assembly of promoter and gene cassettes for pathway engineering
Ramon A, Smith HO
PMID: 21107654
Applied and environmental microbiology. 2011-03-01; 77.6: 1990-8.
[NiFe] hydrogenase from Alteromonas macleodii with unusual stability in the presence of oxygen and high temperature
Vargas WA, Weyman PD, Tong Y, Smith HO, Xu Q
PMID: 21257809

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