Publications

Expert review of vaccines. 2006-10-01; 5.5: 687-94.
Towards a universal group B Streptococcus vaccine using multistrain genome analysis
Tettelin H, Medini D, Donati C, Masignani V
PMID: 17181441
Genome research. 2006-10-01; 16.10: 1241-51.
Uneven chromosome contraction and expansion in the maize genome
Bruggmann R, Bharti AK, Gundlach H, Lai J, Young S, Pontaroli AC, Wei F, Haberer G, Fuks G, Du C, Raymond C, Estep MC, Liu R, Bennetzen JL, Chan AP, Rabinowicz PD, Quackenbush J, Barbazuk WB, Wing RA, Birren B, Nusbaum C, Rounsley S, Mayer KF, Messing J
PMID: 16902087
Journal of bacteriology. 2006-10-01; 188.19: 6841-50.
Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus
Badger JH, Hoover TR, Brun YV, Weiner RM, Laub MT, Alexandre G, Mrázek J, Ren Q, Paulsen IT, Nelson KE, Khouri HM, Radune D, Sosa J, Dodson RJ, Sullivan SA, Rosovitz MJ, Madupu R, Brinkac LM, Durkin AS, Daugherty SC, Kothari SP, Giglio MG, Zhou L, Haft DH, Selengut JD, Davidsen TM, Yang Q, Zafar N, Ward NL
PMID: 16980487
Genomics. 2006-10-01; 88.4: 443-51.
Use of HAPPY mapping for the higher order assembly of the Tetrahymena genome
Hamilton EP, Dear PH, Rowland T, Saks K, Eisen JA, Orias E
PMID: 16782302
Environmental microbiology. 2006-10-01; 8.10: 1805-15.
Microarray and genetic analysis of electron transfer to electrodes in Geobacter sulfurreducens
Holmes DE, Chaudhuri SK, Nevin KP, Mehta T, Methé BA, Liu A, Ward JE, Woodard TL, Webster J, Lovley DR
PMID: 16958761
Proceedings of the National Academy of Sciences of the United States of America. 2006-09-05; 103.36: 13555-9.
Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment
Palenik B, Ren Q, Dupont CL, Myers GS, Heidelberg JF, Badger JH, Madupu R, Nelson WC, Brinkac LM, Dodson RJ, Durkin AS, Daugherty SC, Sullivan SA, Khouri H, Mohamoud Y, Halpin R, Paulsen IT
PMID: 16938853
BMC genomics. 2006-09-05; 7.228.
Genome sequence alterations detected upon passage of Burkholderia mallei ATCC 23344 in culture and in mammalian hosts
Romero CM, DeShazer D, Feldblyum T, Ravel J, Woods D, Kim HS, Yu Y, Ronning CM, Nierman WC
PMID: 16953889
PLoS biology. 2006-09-01; 4.9: e286.
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote
Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA, Krieger CJ, del Toro C, Ryder HF, Williamson SC, Barbeau RA, Hamilton EP, Orias E
PMID: 16933976
The Plant journal : for cell and molecular biology. 2006-09-01; 47.5: 761-75.
Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton
Samuel Yang S, Cheung F, Lee JJ, Ha M, Wei NE, Sze SH, Stelly DM, Thaxton P, Triplett B, Town CD, Jeffrey Chen Z
PMID: 16889650
Genome research. 2006-09-01; 16.9: 1119-25.
Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii
Khan A, Böhme U, Kelly KA, Adlem E, Brooks K, Simmonds M, Mungall K, Quail MA, Arrowsmith C, Chillingworth T, Churcher C, Harris D, Collins M, Fosker N, Fraser A, Hance Z, Jagels K, Moule S, Murphy L, O'Neil S, Rajandream MA, Saunders D, Seeger K, Whitehead S, Mayr T, Xuan X, Watanabe J, Suzuki Y, Wakaguri H, Sugano S, Sugimoto C, Paulsen I, Mackey AJ, Roos DS, Hall N, Berriman M, Barrell B, Sibley LD, Ajioka JW
PMID: 16902086

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