Publications

Bioinformatics (Oxford, England). 2002-01-01; 18.1: 207-8.
Genesis: cluster analysis of microarray data
Sturn A, Quackenbush J, Trajanoski Z
PMID: 11836235
Science (New York, N.Y.). 2001-12-14; 294.5550: 2317-23.
The genome of the natural genetic engineer Agrobacterium tumefaciens C58
Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW
PMID: 11743193
Molecular and biochemical parasitology. 2001-12-01; 118.2: 133-8.
A status report on the sequencing and annotation of the P. falciparum genome
Gardner MJ
PMID: 11738703
Bioinformatics (Oxford, England). 2001-12-01; 17.12: 1123-30.
A probabilistic method for identifying start codons in bacterial genomes
Suzek BE, Ermolaeva MD, Schreiber M, Salzberg SL
PMID: 11751220
Molecular and biochemical parasitology. 2001-12-01; 118.2: 233-45.
Determining liver stage parasite burden by real time quantitative PCR as a method for evaluating pre-erythrocytic malaria vaccine efficacy
Witney AA, Doolan DL, Anthony RM, Weiss WR, Hoffman SL, Carucci DJ
PMID: 11738713
Nature genetics. 2001-12-01; 29.4: 365-71.
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, Vingron M
PMID: 11726920
Molecular and biochemical parasitology. 2001-12-01; 118.2: 201-10.
Profiling the malaria genome: a gene survey of three species of malaria parasite with comparison to other apicomplexan species
Carlton JM, Muller R, Yowell CA, Fluegge MR, Sturrock KA, Pritt JR, Vargas-Serrato E, Galinski MR, Barnwell JW, Mulder N, Kanapin A, Cawley SE, Hide WA, Dame JB
PMID: 11738710
Genome research. 2001-12-01; 11.12: 2133-41.
Toward a cytological characterization of the rice genome
Cheng Z, Buell CR, Wing RA, Gu M, Jiang J
PMID: 11731505
Bioinformatics (Oxford, England). 2001-12-01; 17.12: 1093-104.
DNA sequence quality trimming and vector removal
Chou HH, Holmes MH
PMID: 11751217
Nucleic acids research. 2001-11-15; 29.22: E110.
General method of rapid Smith/Birnstiel mapping adds for gap closure in shotgun microbial genome sequencing projects: application to Pseudomonas putida KT2440
Weinel C, Tümmler B, Hilbert H, Nelson KE, Kiewitz C
PMID: 11713330

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