Publications

Microbial ecology. 2017-11-01; 74.4: 1001-1008.
The Threat of Antimicrobial Resistance on the Human Microbiome
Brinkac L, Voorhies A, Gomez A, Nelson KE
PMID: 28492988
Proceedings of the National Academy of Sciences of the United States of America. 2017-10-17; 114.42: E8885-E8894.
Genome-wide engineering of an infectious clone of herpes simplex virus type 1 using synthetic genomics assembly methods
Oldfield LM, Grzesik P, Voorhies AA, Alperovich N, MacMath D, Najera CD, Chandra DS, Prasad S, Noskov VN, Montague MG, Friedman RM, Desai PJ, Vashee S
PMID: 28928148
Nature communications. 2017-10-16; 8.1: 837.
Gastric acid suppression promotes alcoholic liver disease by inducing overgrowth of intestinal Enterococcus
Llorente C, Jepsen P, Inamine T, Wang L, Bluemel S, Wang HJ, Loomba R, Bajaj JS, Schubert ML, Sikaroodi M, Gillevet PM, Xu J, Kisseleva T, Ho SB, Depew J, Du X, Sørensen HT, Vilstrup H, Nelson KE, Brenner DA, Fouts DE, Schnabl B
PMID: 29038503
BMC bioinformatics. 2017-10-11; 18.1: 448.
VDJPipe: a pipelined tool for pre-processing immune repertoire sequencing data
Christley S, Levin MK, Toby IT, Fonner JM, Monson NL, Rounds WH, Rubelt F, Scarborough W, Scheuermann RH, Cowell LG
PMID: 29020925
Nature communications. 2017-10-10; 8.1: 846.
Alveolar macrophages are critical for broadly-reactive antibody-mediated protection against influenza A virus in mice
He W, Chen CJ, Mullarkey CE, Hamilton JR, Wong CK, Leon PE, Uccellini MB, Chromikova V, Henry C, Hoffman KW, Lim JK, Wilson PC, Miller MS, Krammer F, Palese P, Tan GS
PMID: 29018261
Journal of the California Dental Association. 2017-10-01; 45.10: 557-564.
Targeted Antimicrobial Peptides: A Novel Technology to Eradicate Harmful Streptococcus Mutans
Guo L, Edlund A
PMID: 29899655
Bioelectrochemistry (Amsterdam, Netherlands). 2017-10-01; 117.74-82.
Population dynamics of electrogenic microbial communities in microbial fuel cells started with three different inoculum sources
Ishii S, Suzuki S, Yamanaka Y, Wu A, Nealson KH, Bretschger O
PMID: 28641173
Environmental science and pollution research international. 2017-10-01; 24.28: 22485-22493.
Microbial volatile compounds alter the soil microbial community
Yuan J, Zhao M, Li R, Huang Q, Raza W, Rensing C, Shen Q
PMID: 28803260
Plant, cell & environment. 2017-10-01; 40.10: 2292-2306.
Seed desiccation mechanisms co-opted for vegetative desiccation in the resurrection grass Oropetium thomaeum
VanBuren R, Wai CM, Zhang Q, Song X, Edger PP, Bryant D, Michael TP, Mockler TC, Bartels D
PMID: 28730594
PLoS pathogens. 2017-10-01; 13.10: e1006678.
Single-cell analysis identifies cellular markers of the HIV permissive cell
Rato S, Rausell A, Muñoz M, Telenti A, Ciuffi A
PMID: 29073251

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