Publications

Frontiers in microbiology. 2017-05-30; 8.949.
Nutrient Stoichiometry Shapes Microbial Community Structure in an Evaporitic Shallow Pond
Lee ZM, Poret-Peterson AT, Siefert JL, Kaul D, Moustafa A, Allen AE, Dupont CL, Eguiarte LE, Souza V, Elser JJ
PMID: 28611750
Arthritis research & therapy. 2017-05-12; 19.1: 90.
Comprehensive analysis of treatment response phenotypes in rheumatoid arthritis for pharmacogenetic studies
Standish KA, Huang CC, Curran ME, Schork NJ
PMID: 28494788
Cell metabolism. 2017-05-02; 25.5: 1054-1062.e5.
Gut Microbiome-Based Metagenomic Signature for Non-invasive Detection of Advanced Fibrosis in Human Nonalcoholic Fatty Liver Disease
Loomba R, Seguritan V, Li W, Long T, Klitgord N, Bhatt A, Dulai PS, Caussy C, Bettencourt R, Highlander SK, Jones MB, Sirlin CB, Schnabl B, Brinkac L, Schork N, Chen CH, Brenner DA, Biggs W, Yooseph S, Venter JC, Nelson KE
PMID: 28467925
Genome research. 2017-05-01; 27.5: 722-736.
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Koren S, Walenz BP, Berlin K, Miller JR, Bergman NH, Phillippy AM
PMID: 28298431
Journal of bacteriology. 2017-05-01; 199.9:
Assessment of Insertion Sequence Mobilization as an Adaptive Response to Oxidative Stress in Acinetobacter baumannii Using IS-seq
Wright MS, Mountain S, Beeri K, Adams MD
PMID: 28193905
Oncotarget. 2017-04-25; 8.17: 27786-27799.
Analysis of variability in high throughput screening data: applications to melanoma cell lines and drug responses
Ding KF, Finlay D, Yin H, Hendricks WPD, Sereduk C, Kiefer J, Sekulic A, LoRusso PM, Vuori K, Trent JM, Schork NJ
PMID: 28212541
Nucleic acids research. 2017-04-20; 45.7: e50.
Efficient size-independent chromosome delivery from yeast to cultured cell lines
Brown DM, Chan YA, Desai PJ, Grzesik P, Oldfield LM, Vashee S, Way JC, Silver PA, Glass JI
PMID: 27980064
BMC genomics. 2017-04-13; 18.1: 296.
Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies
Greenwald WW, Klitgord N, Seguritan V, Yooseph S, Venter JC, Garner C, Nelson KE, Li W
PMID: 28407798
Advances in microbial physiology. 2017-04-03; 70.261-313.
Metal Resistance and Its Association With Antibiotic Resistance
Pal C, Asiani K, Arya S, Rensing C, Stekel DJ, Larsson DGJ, Hobman JL
PMID: 28528649
Emerging infectious diseases. 2017-04-01; 23.4: 654-657.
Reassortment of Influenza A Viruses in Wild Birds in Alaska before H5 Clade 2.3.4.4 Outbreaks
Hill NJ, Hussein IT, Davis KR, Ma EJ, Spivey TJ, Ramey AM, Puryear WB, Das SR, Halpin RA, Lin X, Fedorova NB, Suarez DL, Boyce WM, Runstadler JA
PMID: 28322698

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