Publications

The Plant journal : for cell and molecular biology. 2017-02-01; 89.3: 789-804.
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome
Cheng CY, Krishnakumar V, Chan AP, Thibaud-Nissen F, Schobel S, Town CD
PMID: 27862469
Environmental microbiology. 2017-02-01; 19.2: 673-686.
Meta-omic analyses of Baltic Sea cyanobacteria: diversity, community structure and salt acclimation
Celepli N, Sundh J, Ekman M, Dupont CL, Yooseph S, Bergman B, Ininbergs K
PMID: 27871145
Trends in ecology & evolution. 2017-02-01; 32.2: 97-107.
Is It Time for Synthetic Biodiversity Conservation?
Piaggio AJ, Segelbacher G, Seddon PJ, Alphey L, Bennett EL, Carlson RH, Friedman RM, Kanavy D, Phelan R, Redford KH, Rosales M, Slobodian L, Wheeler K
PMID: 27871673
PLoS pathogens. 2017-02-01; 13.2: e1006164.
Zika Virus Antagonizes Type I Interferon Responses during Infection of Human Dendritic Cells
Bowen JR, Quicke KM, Maddur MS, O'Neal JT, McDonald CE, Fedorova NB, Puri V, Shabman RS, Pulendran B, Suthar MS
PMID: 28152048
PLoS computational biology. 2017-02-01; 13.2: e1005339.
Estimating the Respective Contributions of Human and Viral Genetic Variation to HIV Control
Bartha I, McLaren PJ, Brumme C, Harrigan R, Telenti A, Fellay J
PMID: 28182649
Microbial ecology. 2017-02-01; 73.2: 492-503.
The Oral Microbiome of Children: Development, Disease, and Implications Beyond Oral Health
Gomez A, Nelson KE
PMID: 27628595
PLoS pathogens. 2017-01-27; 13.1: e1006151.
Characterization of Early-Phase Neutrophil Extracellular Traps in Urinary Tract Infections
Yu Y, Kwon K, Tsitrin T, Bekele S, Sikorski P, Nelson KE, Pieper R
PMID: 28129394
Nature. 2017-01-26; 541.7638: 536-540.
Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus
Mock T, Otillar RP, Strauss J, McMullan M, Paajanen P, Schmutz J, Salamov A, Sanges R, Toseland A, Ward BJ, Allen AE, Dupont CL, Frickenhaus S, Maumus F, Veluchamy A, Wu T, Barry KW, Falciatore A, Ferrante MI, Fortunato AE, Glöckner G, Gruber A, Hipkin R, Janech MG, Kroth PG, Leese F, Lindquist EA, Lyon BR, Martin J, Mayer C, Parker M, Quesneville H, Raymond JA, Uhlig C, Valas RE, Valentin KU, Worden AZ, Armbrust EV, Clark MD, Bowler C, Green BR, Moulton V, van Oosterhout C, Grigoriev IV
PMID: 28092920
PloS one. 2017-01-26; 12.1: e0170462.
Comprehensive Annotation of Mature Peptides and Genotypes for Zika Virus
Sun G, Larsen CN, Baumgarth N, Klem EB, Scheuermann RH
PMID: 28125631
BMC genomics. 2017-01-18; 18.1: 95.
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
Tørresen OK, Star B, Jentoft S, Reinar WB, Grove H, Miller JR, Walenz BP, Knight J, Ekholm JM, Peluso P, Edvardsen RB, Tooming-Klunderud A, Skage M, Lien S, Jakobsen KS, Nederbragt AJ
PMID: 28100185

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