Publications

PloS one. 2010-11-19; 5.11: e14072.
Genome sequence of the deltaproteobacterial strain NaphS2 and analysis of differential gene expression during anaerobic growth on naphthalene
DiDonato RJ, Young ND, Butler JE, Chin KJ, Hixson KK, Mouser P, Lipton MS, Deboy R, Methé BA
PMID: 21124915
Proceedings of the National Academy of Sciences of the United States of America. 2010-11-16; 107.46: 20033-8.
Spliced leader-based metatranscriptomic analyses lead to recognition of hidden genomic features in dinoflagellates
Lin S, Zhang H, Zhuang Y, Tran B, Gill J
PMID: 21041634
PloS one. 2010-11-12; 5.11: e13963.
Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communities
Yildirim S, Yeoman CJ, Sipos M, Torralba M, Wilson BA, Goldberg TL, Stumpf RM, Leigh SR, White BA, Nelson KE
PMID: 21103066
Nature. 2010-11-04; 468.7320: 60-6.
Genomic and functional adaptation in surface ocean planktonic prokaryotes
Yooseph S, Nealson KH, Rusch DB, McCrow JP, Dupont CL, Kim M, Johnson J, Montgomery R, Ferriera S, Beeson K, Williamson SJ, Tovchigrechko A, Allen AE, Zeigler LA, Sutton G, Eisenstadt E, Rogers YH, Friedman R, Frazier M, Venter JC
PMID: 21048761
Genomics. 2010-11-01; 96.5: 290-302.
Tracing phylogenomic events leading to diversity of Haemophilus influenzae and the emergence of Brazilian Purpuric Fever (BPF)-associated clones
Papazisi L, Ratnayake S, Remortel BG, Bock GR, Liang W, Saeed AI, Liu J, Fleischmann RD, Kilian M, Peterson SN
PMID: 20654709
Molecular microbiology. 2010-11-01; 78.4: 1038-54.
Aspergillus fumigatus AcuM regulates both iron acquisition and gluconeogenesis
Liu H, Gravelat FN, Chiang LY, Chen D, Vanier G, Ejzykowicz DE, Ibrahim AS, Nierman WC, Sheppard DC, Filler SG
PMID: 21062375
Journal of bacteriology. 2010-11-01; 192.21: 5788-98.
Unexpected abundance of coenzyme F(420)-dependent enzymes in Mycobacterium tuberculosis and other actinobacteria
Selengut JD, Haft DH
PMID: 20675471
Microbial ecology. 2010-11-01; 60.4: 721-9.
Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche
Cann IK, Mackie RI, White BA, Forsberg CW, Mongodin E, Daugherty S, Russell JB, Wilson DB, Nelson WC, Nelson KE, Morrison M
PMID: 20585943
Nature methods. 2010-11-01; 7.11: 901-3.
Chemical synthesis of the mouse mitochondrial genome
Gibson DG, Smith HO, Hutchison CA, Venter JC, Merryman C
PMID: 20935651
Science (New York, N.Y.). 2010-10-22; 330.6003: 512-4.
Widespread divergence between incipient Anopheles gambiae species revealed by whole genome sequences
Lawniczak MK, Emrich SJ, Holloway AK, Regier AP, Olson M, White B, Redmond S, Fulton L, Appelbaum E, Godfrey J, Farmer C, Chinwalla A, Yang SP, Minx P, Nelson J, Kyung K, Walenz BP, Garcia-Hernandez E, Aguiar M, Viswanathan LD, Rogers YH, Strausberg RL, Saski CA, Lawson D, Collins FH, Kafatos FC, Christophides GK, Clifton SW, Kirkness EF, Besansky NJ
PMID: 20966253

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