Publications

BMC genomics. 2004-09-29; 5.73.
Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant
Vodkin LO, Khanna A, Shealy R, Clough SJ, Gonzalez DO, Philip R, Zabala G, Thibaud-Nissen F, Sidarous M, Strömvik MV, Shoop E, Schmidt C, Retzel E, Erpelding J, Shoemaker RC, Rodriguez-Huete AM, Polacco JC, Coryell V, Keim P, Gong G, Liu L, Pardinas J, Schweitzer P
PMID: 15453914
Proceedings of the National Academy of Sciences of the United States of America. 2004-09-28; 101.39: 14246-51.
Structural flexibility in the Burkholderia mallei genome
Nierman WC, DeShazer D, Kim HS, Tettelin H, Nelson KE, Feldblyum T, Ulrich RL, Ronning CM, Brinkac LM, Daugherty SC, Davidsen TD, Deboy RT, Dimitrov G, Dodson RJ, Durkin AS, Gwinn ML, Haft DH, Khouri H, Kolonay JF, Madupu R, Mohammoud Y, Nelson WC, Radune D, Romero CM, Sarria S, Selengut J, Shamblin C, Sullivan SA, White O, Yu Y, Zafar N, Zhou L, Fraser CM
PMID: 15377793
Proceedings of the National Academy of Sciences of the United States of America. 2004-09-28; 101.39: 14150-5.
Genetic exchange and plasmid transfers in Borrelia burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typing
Qiu WG, Schutzer SE, Bruno JF, Attie O, Xu Y, Dunn JJ, Fraser CM, Casjens SR, Luft BJ
PMID: 15375210
Proceedings of the National Academy of Sciences of the United States of America. 2004-09-14; 101.37: 13536-41.
Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing
Pearson T, Busch JD, Ravel J, Read TD, Rhoton SD, U'Ren JM, Simonson TS, Kachur SM, Leadem RR, Cardon ML, Van Ert MN, Huynh LY, Fraser CM, Keim P
PMID: 15347815
BMC genomics. 2004-09-13; 5.65.
An integrated 4249 marker FISH/RH map of the canine genome
Breen M, Hitte C, Lorentzen TD, Thomas R, Cadieu E, Sabacan L, Scott A, Evanno G, Parker HG, Kirkness EF, Hudson R, Guyon R, Mahairas GG, Gelfenbeyn B, Fraser CM, André C, Galibert F, Ostrander EA
PMID: 15363096
Journal of theoretical biology. 2004-09-07; 230.1: 133-44.
Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae
Yan B, Methé BA, Lovley DR, Krushkal J
PMID: 15276006
Genetics. 2004-09-01; 168.1: 21-33.
Analysis of Deinococcus radiodurans's transcriptional response to ionizing radiation and desiccation reveals novel proteins that contribute to extreme radioresistance
Tanaka M, Earl AM, Howell HA, Park MJ, Eisen JA, Peterson SN, Battista JR
PMID: 15454524
Frontiers in bioscience : a journal and virtual library. 2004-09-01; 9.2347-72.
Mechanisms of HTLV-1 transformation
Kehn K, Berro R, de la Fuente C, Strouss K, Ghedin E, Dadgar S, Bottazzi ME, Pumfery A, Kashanchi F
PMID: 15353292
Briefings in bioinformatics. 2004-09-01; 5.3: 237-48.
Comparative genome assembly
Pop M, Phillippy A, Delcher AL, Salzberg SL
PMID: 15383210
Trends in microbiology. 2004-09-01; 12.9: 404-5.
Exploring the boundaries of life
Fraser CM
PMID: 15337160

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