Publications

Journal of virology. 2010-06-01; 84.11: 5715-8.
Unseasonal transmission of H3N2 influenza A virus during the swine-origin H1N1 pandemic
Ghedin E, Wentworth DE, Halpin RA, Lin X, Bera J, Depasse J, Fitch A, Griesemer S, Hine E, Katzel DA, Overton L, Proudfoot K, Sitz J, Szczypinski B, StGeorge K, Spiro DJ, Holmes EC
PMID: 20237080
PLoS pathogens. 2010-05-27; 6.5: e1000922.
The early stage of bacterial genome-reductive evolution in the host
Song H, Hwang J, Yi H, Ulrich RL, Yu Y, Nierman WC, Kim HS
PMID: 20523904
BMC biology. 2010-05-25; 8.70.
Expansion of ribosomally produced natural products: a nitrile hydratase- and Nif11-related precursor family
Haft DH, Basu MK, Mitchell DA
PMID: 20500830
Science (New York, N.Y.). 2010-05-21; 328.5981: 994-9.
A catalog of reference genomes from the human microbiome
Human Microbiome Jumpstart Reference Strains Consortium, Nelson KE, Weinstock GM, Highlander SK, Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M, Sodergren E, Chinwalla AT, Feldgarden M, Gevers D, Haas BJ, Madupu R, Ward DV, Birren BW, Gibbs RA, Methe B, Petrosino JF, Strausberg RL, Sutton GG, White OR, Wilson RK, Durkin S, Giglio MG, Gujja S, Howarth C, Kodira CD, Kyrpides N, Mehta T, Muzny DM, Pearson M, Pepin K, Pati A, Qin X, Yandava C, Zeng Q, Zhang L, Berlin AM, Chen L, Hepburn TA, Johnson J, McCorrison J, Miller J, Minx P, Nusbaum C, Russ C, Sykes SM, Tomlinson CM, Young S, Warren WC, Badger J, Crabtree J, Markowitz VM, Orvis J, Cree A, Ferriera S, Fulton LL, Fulton RS, Gillis M, Hemphill LD, Joshi V, Kovar C, Torralba M, Wetterstrand KA, Abouellleil A, Wollam AM, Buhay CJ, Ding Y, Dugan S, FitzGerald MG, Holder M, Hostetler J, Clifton SW, Allen-Vercoe E, Earl AM, Farmer CN, Liolios K, Surette MG, Xu Q, Pohl C, Wilczek-Boney K, Zhu D
PMID: 20489017
PLoS pathogens. 2010-05-06; 6.5: e1000896.
Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing
Eckerle LD, Becker MM, Halpin RA, Li K, Venter E, Lu X, Scherbakova S, Graham RL, Baric RS, Stockwell TB, Spiro DJ, Denison MR
PMID: 20463816
Nucleic acids research. 2010-05-01; 38.8: 2558-69.
Cloning whole bacterial genomes in yeast
Benders GA, Noskov VN, Denisova EA, Lartigue C, Gibson DG, Assad-Garcia N, Chuang RY, Carrera W, Moodie M, Algire MA, Phan Q, Alperovich N, Vashee S, Merryman C, Venter JC, Smith HO, Glass JI, Hutchison CA
PMID: 20211840
Virulence. 2010-05-01; 1.3: 164-73.
Characterization of a 5-azacytidine-induced developmental Aspergillus fumigatus variant
Ben-Ami R, Varga V, Lewis RE, May GS, Nierman WC, Kontoyiannis DP
PMID: 21178435
Microbial ecology. 2010-05-01; 59.4: 646-57.
Antimicrobial resistance of the coral pathogen Vibrio coralliilyticus and Caribbean sister phylotypes isolated from a diseased octocoral
Vizcaino MI, Johnson WR, Kimes NE, Williams K, Torralba M, Nelson KE, Smith GW, Weil E, Moeller PD, Morris PJ
PMID: 20309538
Nucleic acids research. 2010-05-01; 38.8: 2570-6.
Tandem repeat coupled with endonuclease cleavage (TREC): a seamless modification tool for genome engineering in yeast
Noskov VN, Segall-Shapiro TH, Chuang RY
PMID: 20228123
Environmental science & technology. 2010-04-01; 44.7: 2721-7.
Quantification of electron transfer rates to a solid phase electron acceptor through the stages of biofilm formation from single cells to multicellular communities
McLean JS, Wanger G, Gorby YA, Wainstein M, McQuaid J, Ishii SI, Bretschger O, Beyenal H, Nealson KH
PMID: 20199066

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